Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Rnf20Q5DTM8 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Ninj2-202ENSMUST00000112711 853 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Gm9229-201ENSMUST00000222777 126 ntBASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Gapvd1-202ENSMUST00000102800 8339 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Rnf20Q5DTM8 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Gm46209-201ENSMUST00000217912 553 ntBASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Rnf20Q5DTM8 Gm42769-201ENSMUST00000198576 1659 ntBASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Gm15460-201ENSMUST00000118147 391 ntBASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Rnf20Q5DTM8 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms