Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm24158-201ENSMUST00000175263 71 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm29310-201ENSMUST00000185468 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21825-201ENSMUST00000185728 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm29109-201ENSMUST00000185895 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21896-201ENSMUST00000186520 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21873-201ENSMUST00000186728 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21794-201ENSMUST00000187056 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21880-201ENSMUST00000187275 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21826-201ENSMUST00000187451 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21198-201ENSMUST00000188393 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21749-201ENSMUST00000189343 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21901-201ENSMUST00000189568 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm29424-201ENSMUST00000189716 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm28599-201ENSMUST00000189838 694 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21867-201ENSMUST00000189917 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm29269-201ENSMUST00000190087 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21722-201ENSMUST00000190153 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm28423-201ENSMUST00000190701 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21899-201ENSMUST00000190745 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21910-201ENSMUST00000191163 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21849-201ENSMUST00000191571 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm28678-201ENSMUST00000191593 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm20910-201ENSMUST00000193268 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm21871-201ENSMUST00000194621 696 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.78□□□□□ -0.2
Scn2bQ56A07 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Scn2bQ56A07 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn2bQ56A07 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn2bQ56A07 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Scn2bQ56A07 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
Scn2bQ56A07 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.77□□□□□ -0.21
Scn2bQ56A07 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.77□□□□□ -0.21
Scn2bQ56A07 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Gm42466-201ENSMUST00000202099 1301 ntBASIC13.77□□□□□ -0.21
Scn2bQ56A07 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.77□□□□□ -0.21
Scn2bQ56A07 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC13.77□□□□□ -0.21
Scn2bQ56A07 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn2bQ56A07 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn2bQ56A07 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.76□□□□□ -0.21
Scn2bQ56A07 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn2bQ56A07 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn2bQ56A07 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.76□□□□□ -0.21
Scn2bQ56A07 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.76□□□□□ -0.21
Scn2bQ56A07 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Scn2bQ56A07 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms