Protein–RNA interactions for Protein: Q3UW12

Cnga4, Cyclic nucleotide-gated cation channel alpha-4, mousemouse

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cnga4Q3UW12 Gm27459-201ENSMUST00000184860 107 ntBASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Birc2-201ENSMUST00000054878 378 ntBASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Gm37861-201ENSMUST00000193534 2869 ntBASIC14.16□□□□□ -0.14
Cnga4Q3UW12 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Cnga4Q3UW12 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Gm13597-201ENSMUST00000121239 375 ntBASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Luc7l-203ENSMUST00000119928 1441 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Cnga4Q3UW12 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
Cnga4Q3UW12 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Gm13036-201ENSMUST00000117799 748 ntBASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Gm21362-201ENSMUST00000194272 928 ntBASIC14.14□□□□□ -0.15
Cnga4Q3UW12 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 AC238940.1-201ENSMUST00000225106 1858 ntBASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cnga4Q3UW12 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Gm2445-201ENSMUST00000182798 989 ntBASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Gm34391-201ENSMUST00000203706 907 ntBASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 9430038I01Rik-201ENSMUST00000068996 1126 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Tnfrsf21-201ENSMUST00000024708 3626 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Dhtkd1-202ENSMUST00000095147 5480 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cnga4Q3UW12 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms