Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trim43bP86448 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trim43bP86448 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.37□□□□□ -0.11
Trim43bP86448 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.37□□□□□ -0.11
Trim43bP86448 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC14.37□□□□□ -0.11
Trim43bP86448 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trim43bP86448 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trim43bP86448 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim43bP86448 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim43bP86448 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Trim43bP86448 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim43bP86448 Cebpzos-202ENSMUST00000180077 602 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Gm38225-201ENSMUST00000194001 393 ntBASIC14.36□□□□□ -0.11
Trim43bP86448 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.36□□□□□ -0.11
Trim43bP86448 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14.36□□□□□ -0.11
Trim43bP86448 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
Trim43bP86448 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Gm42934-201ENSMUST00000196920 1345 ntBASIC14.36□□□□□ -0.11
Trim43bP86448 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Trim43bP86448 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trim43bP86448 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trim43bP86448 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim43bP86448 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Mir449b-201ENSMUST00000104833 80 ntBASIC14.35□□□□□ -0.11
Trim43bP86448 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC14.35□□□□□ -0.11
Trim43bP86448 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC14.35□□□□□ -0.11
Trim43bP86448 Gm13616-201ENSMUST00000120600 222 ntBASIC14.35□□□□□ -0.11
Trim43bP86448 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.35□□□□□ -0.11
Trim43bP86448 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.35□□□□□ -0.11
Trim43bP86448 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Ankra2-208ENSMUST00000226100 1476 ntBASIC14.35□□□□□ -0.11
Trim43bP86448 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trim43bP86448 Pgghg-201ENSMUST00000079403 2981 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.35□□□□□ -0.11
Trim43bP86448 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.35□□□□□ -0.11
Trim43bP86448 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trim43bP86448 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trim43bP86448 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.34□□□□□ -0.11
Trim43bP86448 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trim43bP86448 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trim43bP86448 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trim43bP86448 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 60.3 ms