Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Rpl39P62892 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 AC126549.2-201ENSMUST00000223997 1976 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC9.94□□□□□ -0.82
Rpl39P62892 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Rpl39P62892 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC9.94□□□□□ -0.82
Rpl39P62892 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Rpl39P62892 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 Mir7071-201ENSMUST00000184847 69 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC9.94□□□□□ -0.82
Rpl39P62892 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Gm43347-201ENSMUST00000200226 580 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 Gm45747-201ENSMUST00000212203 999 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 Gm18041-201ENSMUST00000218210 618 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 AC154595.3-201ENSMUST00000224579 384 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 Gm10154-201ENSMUST00000084445 354 ntBASIC9.94□□□□□ -0.82
Rpl39P62892 Dst-213ENSMUST00000183302 8788 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39P62892 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39P62892 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC9.94□□□□□ -0.82
Rpl39P62892 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39P62892 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rpl39P62892 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rpl39P62892 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Gm5763-201ENSMUST00000155951 1530 ntBASIC9.93□□□□□ -0.82
Rpl39P62892 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Ahdc1-201ENSMUST00000044521 6105 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Rpl39P62892 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rpl39P62892 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC9.93□□□□□ -0.82
Rpl39P62892 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC9.93□□□□□ -0.82
Rpl39P62892 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC9.93□□□□□ -0.82
Rpl39P62892 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC9.93□□□□□ -0.82
Rpl39P62892 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rpl39P62892 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC9.93□□□□□ -0.82
Rpl39P62892 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Rpl39P62892 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rpl39P62892 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC9.92□□□□□ -0.82
Rpl39P62892 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Rpl39P62892 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Rpl39P62892 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Rpl39P62892 Gm13233-201ENSMUST00000118760 1443 ntBASIC9.92□□□□□ -0.82
Rpl39P62892 Gm13244-201ENSMUST00000118855 1446 ntBASIC9.92□□□□□ -0.82
Rpl39P62892 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Rpl39P62892 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Prkca-201ENSMUST00000059595 8409 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rpl39P62892 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms