Protein–RNA interactions for Protein: P61025

Cks1b, Cyclin-dependent kinases regulatory subunit 1, mousemouse

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1bP61025 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Cmtm5-203ENSMUST00000227441 610 ntBASIC9.97□□□□□ -0.81
Cks1bP61025 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cks1bP61025 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Gm10313-201ENSMUST00000095320 1002 ntBASIC9.97□□□□□ -0.81
Cks1bP61025 Irf8-201ENSMUST00000047737 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Trpc7-207ENSMUST00000173817 2406 ntTSL 5 BASIC9.97□□□□□ -0.81
Cks1bP61025 Trpc7-208ENSMUST00000174457 2424 ntTSL 5 BASIC9.97□□□□□ -0.81
Cks1bP61025 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Galnt6os-201ENSMUST00000160960 1389 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC9.97□□□□□ -0.81
Cks1bP61025 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC9.97□□□□□ -0.81
Cks1bP61025 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Nacc2-202ENSMUST00000114159 6675 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Map4-205ENSMUST00000165876 5573 ntAPPRIS ALT2 TSL 5 BASIC9.97□□□□□ -0.81
Cks1bP61025 A930024N18Rik-201ENSMUST00000181251 3955 ntTSL 1 (best) BASIC9.97□□□□□ -0.81
Cks1bP61025 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Gm44645-201ENSMUST00000205492 1653 ntBASIC9.96□□□□□ -0.81
Cks1bP61025 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Cks1bP61025 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.81
Cks1bP61025 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC9.96□□□□□ -0.81
Cks1bP61025 Nedd9-202ENSMUST00000163623 4626 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Synpo-209ENSMUST00000143275 5040 ntAPPRIS ALT2 TSL 5 BASIC9.96□□□□□ -0.81
Cks1bP61025 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Cux1-204ENSMUST00000175975 10945 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Gm29361-201ENSMUST00000183323 2000 ntBASIC9.96□□□□□ -0.81
Cks1bP61025 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
Cks1bP61025 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC9.96□□□□□ -0.82
Cks1bP61025 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Cks1bP61025 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Cks1bP61025 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.96□□□□□ -0.82
Cks1bP61025 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC9.96□□□□□ -0.82
Cks1bP61025 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
Cks1bP61025 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 AC153889.1-201ENSMUST00000219257 330 ntBASIC9.96□□□□□ -0.82
Cks1bP61025 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Rims3-202ENSMUST00000106283 6437 ntAPPRIS P1 TSL 5 BASIC9.96□□□□□ -0.82
Cks1bP61025 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC9.96□□□□□ -0.82
Cks1bP61025 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 R3hdm4-202ENSMUST00000171416 1543 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Sh3pxd2a-202ENSMUST00000111800 10380 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Tbc1d1-202ENSMUST00000101195 5432 ntAPPRIS P3 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Cks1bP61025 Gm44981-201ENSMUST00000205549 1943 ntBASIC9.95□□□□□ -0.82
Cks1bP61025 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Epb41l1-203ENSMUST00000103136 6249 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Sgcb-201ENSMUST00000081170 3786 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Cks1bP61025 Nfatc2-209ENSMUST00000171689 2742 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Slc52a2-201ENSMUST00000023220 2700 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC9.95□□□□□ -0.82
Cks1bP61025 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Gm15372-201ENSMUST00000120729 834 ntBASIC9.95□□□□□ -0.82
Cks1bP61025 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC9.95□□□□□ -0.82
Cks1bP61025 Gm23547-201ENSMUST00000158210 271 ntBASIC9.95□□□□□ -0.82
Cks1bP61025 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Otx2os1-206ENSMUST00000228153 787 ntBASIC9.95□□□□□ -0.82
Cks1bP61025 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Cks1bP61025 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms