Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 AC154262.2-201ENSMUST00000224310 2293 ntBASIC15.56■□□□□ 0.08
Tpm1P58771 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC15.56■□□□□ 0.08
Tpm1P58771 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Tpm1P58771 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Tpm1P58771 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC15.55■□□□□ 0.08
Tpm1P58771 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC15.55■□□□□ 0.08
Tpm1P58771 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC15.55■□□□□ 0.08
Tpm1P58771 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC15.55■□□□□ 0.08
Tpm1P58771 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Gm25925-201ENSMUST00000158314 306 ntBASIC15.55■□□□□ 0.08
Tpm1P58771 Gm10275-202ENSMUST00000168697 495 ntBASIC15.55■□□□□ 0.08
Tpm1P58771 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Umpk-ps-201ENSMUST00000211897 827 ntBASIC15.55■□□□□ 0.08
Tpm1P58771 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Tpm1P58771 Mrpl46-201ENSMUST00000032841 1134 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Gm10275-201ENSMUST00000092620 635 ntBASIC15.55■□□□□ 0.08
Tpm1P58771 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Tpm1P58771 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC15.55■□□□□ 0.08
Tpm1P58771 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Tpm1P58771 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Tpm1P58771 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Tpm1P58771 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Tpm1P58771 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
Tpm1P58771 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC15.54■□□□□ 0.08
Tpm1P58771 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Gm21362-201ENSMUST00000194272 928 ntBASIC15.54■□□□□ 0.08
Tpm1P58771 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC15.54■□□□□ 0.08
Tpm1P58771 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Tpm1P58771 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tpm1P58771 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC15.53■□□□□ 0.08
Tpm1P58771 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tpm1P58771 Rbl1-201ENSMUST00000029170 4862 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Gm13410-201ENSMUST00000117058 1415 ntBASIC15.53■□□□□ 0.08
Tpm1P58771 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
Tpm1P58771 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Mypopos-202ENSMUST00000205975 2321 ntBASIC15.53■□□□□ 0.08
Tpm1P58771 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tpm1P58771 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC15.53■□□□□ 0.08
Tpm1P58771 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Tpm1P58771 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Tpm1P58771 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms