Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC11.27□□□□□ -0.61
Sssca1P56873 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Sssca1P56873 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Sssca1P56873 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC11.26□□□□□ -0.61
Sssca1P56873 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
Sssca1P56873 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Grin1-202ENSMUST00000114307 4127 ntTSL 5 BASIC11.26□□□□□ -0.61
Sssca1P56873 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Sssca1P56873 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC11.26□□□□□ -0.61
Sssca1P56873 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.26□□□□□ -0.61
Sssca1P56873 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC11.26□□□□□ -0.61
Sssca1P56873 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC11.26□□□□□ -0.61
Sssca1P56873 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC11.26□□□□□ -0.61
Sssca1P56873 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.26□□□□□ -0.61
Sssca1P56873 Gm7461-201ENSMUST00000058918 827 ntBASIC11.26□□□□□ -0.61
Sssca1P56873 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Gm6756-201ENSMUST00000180647 1620 ntBASIC11.26□□□□□ -0.61
Sssca1P56873 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.26□□□□□ -0.61
Sssca1P56873 Cmip-201ENSMUST00000095172 2276 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC11.26□□□□□ -0.61
Sssca1P56873 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Sssca1P56873 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC11.26□□□□□ -0.61
Sssca1P56873 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.25□□□□□ -0.61
Sssca1P56873 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
Sssca1P56873 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC11.25□□□□□ -0.61
Sssca1P56873 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Top2b-201ENSMUST00000017629 10335 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.25□□□□□ -0.61
Sssca1P56873 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC11.25□□□□□ -0.61
Sssca1P56873 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Sssca1P56873 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC11.25□□□□□ -0.61
Sssca1P56873 Gm11543-201ENSMUST00000120758 370 ntBASIC11.25□□□□□ -0.61
Sssca1P56873 Retsat-204ENSMUST00000176168 1203 ntTSL 5 BASIC11.25□□□□□ -0.61
Sssca1P56873 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC11.25□□□□□ -0.61
Sssca1P56873 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC11.25□□□□□ -0.61
Sssca1P56873 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC11.25□□□□□ -0.61
Sssca1P56873 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC11.25□□□□□ -0.61
Sssca1P56873 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC11.25□□□□□ -0.61
Sssca1P56873 AC154222.1-201ENSMUST00000223882 475 ntBASIC11.25□□□□□ -0.61
Sssca1P56873 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
Sssca1P56873 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 CT025610.1-201ENSMUST00000224552 1786 ntBASIC11.25□□□□□ -0.61
Sssca1P56873 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Gm13003-201ENSMUST00000151040 2904 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Sssca1P56873 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms