Protein–RNA interactions for Protein: P40630

Tfam, Transcription factor A, mitochondrial, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TfamP40630 AC124549.3-201ENSMUST00000225541 367 ntBASIC13.52□□□□□ -0.25
TfamP40630 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
TfamP40630 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TfamP40630 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.52□□□□□ -0.25
TfamP40630 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TfamP40630 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Matn2-206ENSMUST00000228570 2798 ntBASIC13.51□□□□□ -0.25
TfamP40630 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.51□□□□□ -0.25
TfamP40630 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.51□□□□□ -0.25
TfamP40630 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TfamP40630 Gm6222-201ENSMUST00000120787 396 ntBASIC13.51□□□□□ -0.25
TfamP40630 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.51□□□□□ -0.25
TfamP40630 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC13.51□□□□□ -0.25
TfamP40630 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.51□□□□□ -0.25
TfamP40630 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TfamP40630 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
TfamP40630 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC13.51□□□□□ -0.25
TfamP40630 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
TfamP40630 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TfamP40630 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TfamP40630 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 BC001981-202ENSMUST00000191393 1545 ntBASIC13.5□□□□□ -0.25
TfamP40630 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TfamP40630 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Gm13015-201ENSMUST00000118674 204 ntBASIC13.5□□□□□ -0.25
TfamP40630 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.5□□□□□ -0.25
TfamP40630 Gm13823-201ENSMUST00000119930 345 ntBASIC13.5□□□□□ -0.25
TfamP40630 AA619741-201ENSMUST00000195095 646 ntBASIC13.5□□□□□ -0.25
TfamP40630 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.5□□□□□ -0.25
TfamP40630 Gm18049-201ENSMUST00000208909 581 ntBASIC13.5□□□□□ -0.25
TfamP40630 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.5□□□□□ -0.25
TfamP40630 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.5□□□□□ -0.25
TfamP40630 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.5□□□□□ -0.25
TfamP40630 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.5□□□□□ -0.25
TfamP40630 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TfamP40630 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
TfamP40630 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.5□□□□□ -0.25
TfamP40630 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.5□□□□□ -0.25
TfamP40630 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.5□□□□□ -0.25
TfamP40630 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TfamP40630 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Gm37019-201ENSMUST00000192133 2134 ntBASIC13.49□□□□□ -0.25
TfamP40630 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC13.49□□□□□ -0.25
TfamP40630 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TfamP40630 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TfamP40630 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TfamP40630 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms