Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HmgclP38060 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
HmgclP38060 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.74□□□□□ -0.21
HmgclP38060 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
HmgclP38060 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
HmgclP38060 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.74□□□□□ -0.21
HmgclP38060 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
HmgclP38060 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HmgclP38060 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC13.73□□□□□ -0.21
HmgclP38060 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.73□□□□□ -0.21
HmgclP38060 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC13.73□□□□□ -0.21
HmgclP38060 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.73□□□□□ -0.21
HmgclP38060 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HmgclP38060 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.73□□□□□ -0.21
HmgclP38060 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC13.73□□□□□ -0.21
HmgclP38060 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.73□□□□□ -0.21
HmgclP38060 Gm8927-201ENSMUST00000181978 981 ntBASIC13.73□□□□□ -0.21
HmgclP38060 Gm27989-201ENSMUST00000184721 107 ntBASIC13.73□□□□□ -0.21
HmgclP38060 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC13.73□□□□□ -0.21
HmgclP38060 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.73□□□□□ -0.21
HmgclP38060 Gm4971-201ENSMUST00000205991 1108 ntBASIC13.73□□□□□ -0.21
HmgclP38060 Gm44719-201ENSMUST00000206404 149 ntBASIC13.73□□□□□ -0.21
HmgclP38060 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Gm3222-201ENSMUST00000071282 990 ntBASIC13.73□□□□□ -0.21
HmgclP38060 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
HmgclP38060 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.73□□□□□ -0.21
HmgclP38060 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
HmgclP38060 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
HmgclP38060 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.73□□□□□ -0.21
HmgclP38060 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.73□□□□□ -0.21
HmgclP38060 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC13.72□□□□□ -0.21
HmgclP38060 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC13.72□□□□□ -0.21
HmgclP38060 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HmgclP38060 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.72□□□□□ -0.21
HmgclP38060 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.72□□□□□ -0.21
HmgclP38060 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Gm7390-201ENSMUST00000212452 1216 ntBASIC13.72□□□□□ -0.21
HmgclP38060 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.72□□□□□ -0.21
HmgclP38060 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
HmgclP38060 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
HmgclP38060 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.72□□□□□ -0.21
HmgclP38060 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
HmgclP38060 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
HmgclP38060 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HmgclP38060 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HmgclP38060 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HmgclP38060 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.71□□□□□ -0.21
HmgclP38060 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HmgclP38060 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
HmgclP38060 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC13.71□□□□□ -0.21
HmgclP38060 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
HmgclP38060 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
HmgclP38060 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.71□□□□□ -0.21
HmgclP38060 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.71□□□□□ -0.21
HmgclP38060 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.71□□□□□ -0.21
HmgclP38060 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
HmgclP38060 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms