Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rfc1P35601 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rfc1P35601 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.69□□□□□ -0.06
Rfc1P35601 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Gm8749-201ENSMUST00000117737 331 ntBASIC14.69□□□□□ -0.06
Rfc1P35601 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.69□□□□□ -0.06
Rfc1P35601 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.69□□□□□ -0.06
Rfc1P35601 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Ccpg1-208ENSMUST00000150826 2939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.69□□□□□ -0.06
Rfc1P35601 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Rfc1P35601 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Rfc1P35601 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Rfc1P35601 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.68□□□□□ -0.06
Rfc1P35601 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.68□□□□□ -0.06
Rfc1P35601 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Rfc1P35601 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.68□□□□□ -0.06
Rfc1P35601 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Rfc1P35601 Mir5131-201ENSMUST00000175426 93 ntBASIC14.68□□□□□ -0.06
Rfc1P35601 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC14.68□□□□□ -0.06
Rfc1P35601 Gm18195-201ENSMUST00000207604 706 ntBASIC14.68□□□□□ -0.06
Rfc1P35601 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC14.68□□□□□ -0.06
Rfc1P35601 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Rfc1P35601 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
Rfc1P35601 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Map2k4-201ENSMUST00000046963 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rfc1P35601 AC025913.2-201ENSMUST00000220136 1766 ntBASIC14.68□□□□□ -0.06
Rfc1P35601 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Ildr1-202ENSMUST00000089618 2850 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Ibsp-201ENSMUST00000031246 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rfc1P35601 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC14.67□□□□□ -0.06
Rfc1P35601 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Mir5126-201ENSMUST00000175513 77 ntBASIC14.67□□□□□ -0.06
Rfc1P35601 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rfc1P35601 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Rfc1P35601 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
Rfc1P35601 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rfc1P35601 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC14.67□□□□□ -0.06
Rfc1P35601 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
Rfc1P35601 Klhl26-205ENSMUST00000210250 2974 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rfc1P35601 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rfc1P35601 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms