Protein–RNA interactions for Protein: P35441

Thbs1, Thrombospondin-1, mousemouse

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thbs1P35441 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Thbs1P35441 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Thbs1P35441 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Rpl36al-203ENSMUST00000110620 757 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Thbs1P35441 Gm12428-201ENSMUST00000119844 727 ntBASIC12.9□□□□□ -0.34
Thbs1P35441 Gm14057-201ENSMUST00000120631 482 ntBASIC12.9□□□□□ -0.34
Thbs1P35441 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Gm7774-201ENSMUST00000200064 533 ntBASIC12.9□□□□□ -0.34
Thbs1P35441 Gm44719-201ENSMUST00000206404 149 ntBASIC12.9□□□□□ -0.34
Thbs1P35441 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.9□□□□□ -0.34
Thbs1P35441 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
Thbs1P35441 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC12.9□□□□□ -0.34
Thbs1P35441 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Zbp1-201ENSMUST00000029018 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.9□□□□□ -0.34
Thbs1P35441 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC12.9□□□□□ -0.34
Thbs1P35441 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Thbs1P35441 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Thbs1P35441 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Thbs1P35441 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Mir449b-201ENSMUST00000104833 80 ntBASIC12.89□□□□□ -0.35
Thbs1P35441 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Thbs1P35441 Gm15653-201ENSMUST00000119247 907 ntBASIC12.89□□□□□ -0.35
Thbs1P35441 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Thbs1P35441 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Gm28630-201ENSMUST00000187806 498 ntBASIC12.89□□□□□ -0.35
Thbs1P35441 Gm5779-201ENSMUST00000218467 910 ntBASIC12.89□□□□□ -0.35
Thbs1P35441 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 AC114543.1-201ENSMUST00000226451 1558 ntBASIC12.89□□□□□ -0.35
Thbs1P35441 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Thbs1P35441 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Thbs1P35441 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Thbs1P35441 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms