Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
Nckap1P28660 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.87□□□□□ -0.19
Nckap1P28660 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Nckap1P28660 Gm37728-201ENSMUST00000195025 2292 ntBASIC13.87□□□□□ -0.19
Nckap1P28660 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC13.87□□□□□ -0.19
Nckap1P28660 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Nabp1-201ENSMUST00000027279 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.86□□□□□ -0.19
Nckap1P28660 Gm13385-201ENSMUST00000121089 220 ntBASIC13.86□□□□□ -0.19
Nckap1P28660 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC13.86□□□□□ -0.19
Nckap1P28660 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC13.86□□□□□ -0.19
Nckap1P28660 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC13.86□□□□□ -0.19
Nckap1P28660 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC13.86□□□□□ -0.19
Nckap1P28660 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC13.86□□□□□ -0.19
Nckap1P28660 Gm24420-201ENSMUST00000176676 59 ntBASIC13.86□□□□□ -0.19
Nckap1P28660 Gm8927-201ENSMUST00000181978 981 ntBASIC13.86□□□□□ -0.19
Nckap1P28660 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Gm7446-201ENSMUST00000221035 1240 ntBASIC13.86□□□□□ -0.19
Nckap1P28660 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Gm3222-201ENSMUST00000071282 990 ntBASIC13.86□□□□□ -0.19
Nckap1P28660 Gm25857-201ENSMUST00000082788 129 ntBASIC13.86□□□□□ -0.19
Nckap1P28660 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Nckap1P28660 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Nckap1P28660 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Nckap1P28660 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.85□□□□□ -0.19
Nckap1P28660 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nckap1P28660 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.85□□□□□ -0.19
Nckap1P28660 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Gm15240-201ENSMUST00000118156 720 ntBASIC13.85□□□□□ -0.19
Nckap1P28660 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC13.85□□□□□ -0.19
Nckap1P28660 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.85□□□□□ -0.19
Nckap1P28660 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC13.85□□□□□ -0.19
Nckap1P28660 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 AC131690.1-201ENSMUST00000218406 374 ntBASIC13.85□□□□□ -0.19
Nckap1P28660 CT030657.3-201ENSMUST00000222707 1200 ntBASIC13.85□□□□□ -0.19
Nckap1P28660 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Nckap1P28660 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Nckap1P28660 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.85□□□□□ -0.19
Nckap1P28660 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.85□□□□□ -0.19
Nckap1P28660 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Nckap1P28660 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Nckap1P28660 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Nckap1P28660 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.85□□□□□ -0.19
Nckap1P28660 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.85□□□□□ -0.19
Nckap1P28660 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.84□□□□□ -0.19
Nckap1P28660 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nckap1P28660 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Nckap1P28660 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC13.84□□□□□ -0.19
Nckap1P28660 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms