Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Sp1O89090 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sp1O89090 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC14.04□□□□□ -0.16
Sp1O89090 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.04□□□□□ -0.16
Sp1O89090 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Sp1O89090 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sp1O89090 Gm11478-201ENSMUST00000117851 599 ntBASIC14.04□□□□□ -0.16
Sp1O89090 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC14.04□□□□□ -0.16
Sp1O89090 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Sp1O89090 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC14.04□□□□□ -0.16
Sp1O89090 Gm5519-201ENSMUST00000042061 513 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sp1O89090 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC14.04□□□□□ -0.16
Sp1O89090 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Sp1O89090 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Sp1O89090 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Sp1O89090 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.03□□□□□ -0.16
Sp1O89090 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sp1O89090 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Gm12960-201ENSMUST00000120017 1066 ntBASIC14.03□□□□□ -0.16
Sp1O89090 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC14.03□□□□□ -0.16
Sp1O89090 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC14.03□□□□□ -0.16
Sp1O89090 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC14.03□□□□□ -0.16
Sp1O89090 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sp1O89090 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC14.03□□□□□ -0.16
Sp1O89090 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Sp1O89090 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Oaz1-203ENSMUST00000179172 744 ntTSL 5 BASIC14.03□□□□□ -0.16
Sp1O89090 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC14.03□□□□□ -0.16
Sp1O89090 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC14.03□□□□□ -0.16
Sp1O89090 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC14.03□□□□□ -0.16
Sp1O89090 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC14.03□□□□□ -0.16
Sp1O89090 CT030657.3-201ENSMUST00000222707 1200 ntBASIC14.03□□□□□ -0.16
Sp1O89090 AC150560.1-201ENSMUST00000227731 1187 ntBASIC14.03□□□□□ -0.16
Sp1O89090 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Oaz1-ps-201ENSMUST00000052440 681 ntBASIC14.03□□□□□ -0.16
Sp1O89090 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Sp1O89090 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Sp1O89090 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Sp1O89090 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Sp1O89090 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Sp1O89090 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp1O89090 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp1O89090 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp1O89090 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.02□□□□□ -0.16
Sp1O89090 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Sp1O89090 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp1O89090 Gm13689-201ENSMUST00000119360 685 ntBASIC14.02□□□□□ -0.17
Sp1O89090 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC14.02□□□□□ -0.17
Sp1O89090 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp1O89090 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.02□□□□□ -0.17
Sp1O89090 AC130829.1-201ENSMUST00000221548 494 ntBASIC14.02□□□□□ -0.17
Sp1O89090 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp1O89090 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp1O89090 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Sp1O89090 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp1O89090 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp1O89090 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Sp1O89090 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms