Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.88□□□□□ -0.35
Cops4O88544 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.88□□□□□ -0.35
Cops4O88544 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.88□□□□□ -0.35
Cops4O88544 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.88□□□□□ -0.35
Cops4O88544 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.88□□□□□ -0.35
Cops4O88544 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Cops4O88544 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.88□□□□□ -0.35
Cops4O88544 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
Cops4O88544 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.88□□□□□ -0.35
Cops4O88544 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.88□□□□□ -0.35
Cops4O88544 Ubap2l-204ENSMUST00000195995 3516 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Gm15477-201ENSMUST00000140578 2130 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Cops4O88544 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.87□□□□□ -0.35
Cops4O88544 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.87□□□□□ -0.35
Cops4O88544 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Cops4O88544 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Cops4O88544 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Cops4O88544 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.87□□□□□ -0.35
Cops4O88544 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.87□□□□□ -0.35
Cops4O88544 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.87□□□□□ -0.35
Cops4O88544 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.87□□□□□ -0.35
Cops4O88544 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
Cops4O88544 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Cops4O88544 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.86□□□□□ -0.35
Cops4O88544 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Cops4O88544 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC12.86□□□□□ -0.35
Cops4O88544 Gm18733-201ENSMUST00000173950 856 ntBASIC12.86□□□□□ -0.35
Cops4O88544 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Mzt1-203ENSMUST00000227948 952 ntBASIC12.86□□□□□ -0.35
Cops4O88544 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Noto-201ENSMUST00000089578 1602 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.86□□□□□ -0.35
Cops4O88544 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Cops4O88544 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Cops4O88544 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Cops4O88544 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cops4O88544 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.85□□□□□ -0.35
Cops4O88544 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC12.85□□□□□ -0.35
Cops4O88544 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Cops4O88544 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Cops4O88544 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.85□□□□□ -0.35
Cops4O88544 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC12.85□□□□□ -0.35
Cops4O88544 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Cops4O88544 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms