Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Gm2810-201ENSMUST00000118681 990 ntBASIC13.31□□□□□ -0.28
Vti1bO88384 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.31□□□□□ -0.28
Vti1bO88384 Gm9182-201ENSMUST00000217829 639 ntBASIC13.31□□□□□ -0.28
Vti1bO88384 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.31□□□□□ -0.28
Vti1bO88384 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC13.31□□□□□ -0.28
Vti1bO88384 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Vti1bO88384 Slc34a1-201ENSMUST00000057167 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Vti1bO88384 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Vti1bO88384 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Vti1bO88384 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Per1-206ENSMUST00000166748 4636 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Vti1bO88384 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.3□□□□□ -0.28
Vti1bO88384 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.3□□□□□ -0.28
Vti1bO88384 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.3□□□□□ -0.28
Vti1bO88384 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.3□□□□□ -0.28
Vti1bO88384 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Gm14042-201ENSMUST00000120139 833 ntBASIC13.3□□□□□ -0.28
Vti1bO88384 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.3□□□□□ -0.28
Vti1bO88384 Gm43575-201ENSMUST00000196420 516 ntBASIC13.3□□□□□ -0.28
Vti1bO88384 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.3□□□□□ -0.28
Vti1bO88384 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Gm42934-201ENSMUST00000196920 1345 ntBASIC13.3□□□□□ -0.28
Vti1bO88384 Gm6018-201ENSMUST00000216090 1306 ntBASIC13.3□□□□□ -0.28
Vti1bO88384 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vti1bO88384 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC13.3□□□□□ -0.28
Vti1bO88384 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Vti1bO88384 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Vti1bO88384 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Vti1bO88384 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.29□□□□□ -0.28
Vti1bO88384 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.29□□□□□ -0.28
Vti1bO88384 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Vti1bO88384 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC13.29□□□□□ -0.28
Vti1bO88384 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Vti1bO88384 Mir6990-201ENSMUST00000183724 91 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms