Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.99□□□□□ -0.01
Nr1i3O35627 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1i3O35627 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Nr1i3O35627 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Gm8337-201ENSMUST00000187358 1938 ntBASIC14.98□□□□□ -0.01
Nr1i3O35627 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Gm6916-202ENSMUST00000205523 195 ntBASIC14.98□□□□□ -0.01
Nr1i3O35627 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.98□□□□□ -0.01
Nr1i3O35627 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.98□□□□□ -0.01
Nr1i3O35627 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Nr1i3O35627 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Mir698-201ENSMUST00000102164 109 ntBASIC14.97□□□□□ -0.01
Nr1i3O35627 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Gm24158-201ENSMUST00000175263 71 ntBASIC14.97□□□□□ -0.01
Nr1i3O35627 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.97□□□□□ -0.01
Nr1i3O35627 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Gm43514-201ENSMUST00000198852 424 ntBASIC14.97□□□□□ -0.01
Nr1i3O35627 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.97□□□□□ -0.01
Nr1i3O35627 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Nr1i3O35627 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Nr1i3O35627 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Nr1i3O35627 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.96□□□□□ -0.01
Nr1i3O35627 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.96□□□□□ -0.01
Nr1i3O35627 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.96□□□□□ -0.01
Nr1i3O35627 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Nr1i3O35627 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC14.96□□□□□ -0.01
Nr1i3O35627 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.96□□□□□ -0.01
Nr1i3O35627 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Nr1i3O35627 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms