Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Mir7684-201ENSMUST00000183858 60 ntBASIC13.13□□□□□ -0.31
Cx3cl1O35188 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cx3cl1O35188 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Gm15460-201ENSMUST00000118147 391 ntBASIC13.12□□□□□ -0.31
Cx3cl1O35188 Gm14057-201ENSMUST00000120631 482 ntBASIC13.12□□□□□ -0.31
Cx3cl1O35188 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.12□□□□□ -0.31
Cx3cl1O35188 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC13.12□□□□□ -0.31
Cx3cl1O35188 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.12□□□□□ -0.31
Cx3cl1O35188 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.12□□□□□ -0.31
Cx3cl1O35188 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cx3cl1O35188 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC13.11□□□□□ -0.31
Cx3cl1O35188 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 AC139350.3-201ENSMUST00000226151 420 ntBASIC13.11□□□□□ -0.31
Cx3cl1O35188 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cx3cl1O35188 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Acot6-202ENSMUST00000222921 3622 ntBASIC13.1□□□□□ -0.31
Cx3cl1O35188 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC13.1□□□□□ -0.31
Cx3cl1O35188 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cx3cl1O35188 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC13.1□□□□□ -0.31
Cx3cl1O35188 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Cx3cl1O35188 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms