Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 AC117194.1-201ENSMUST00000224847 3002 ntBASIC14.32□□□□□ -0.12
Trove2O08848 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC14.32□□□□□ -0.12
Trove2O08848 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC14.32□□□□□ -0.12
Trove2O08848 Gm12260-201ENSMUST00000122447 411 ntBASIC14.32□□□□□ -0.12
Trove2O08848 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trove2O08848 Gm8584-201ENSMUST00000171982 758 ntBASIC14.32□□□□□ -0.12
Trove2O08848 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC14.32□□□□□ -0.12
Trove2O08848 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Trove2O08848 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.32□□□□□ -0.12
Trove2O08848 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Trove2O08848 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
Trove2O08848 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Dcaf7-201ENSMUST00000058438 5750 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Dysf-213ENSMUST00000203803 6590 ntTSL 5 BASIC14.32□□□□□ -0.12
Trove2O08848 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Trove2O08848 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trove2O08848 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.31□□□□□ -0.12
Trove2O08848 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Gm16198-201ENSMUST00000118766 670 ntBASIC14.31□□□□□ -0.12
Trove2O08848 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.31□□□□□ -0.12
Trove2O08848 Gm8597-201ENSMUST00000191525 1109 ntBASIC14.31□□□□□ -0.12
Trove2O08848 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Gm44771-201ENSMUST00000206975 626 ntBASIC14.31□□□□□ -0.12
Trove2O08848 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC14.31□□□□□ -0.12
Trove2O08848 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC14.31□□□□□ -0.12
Trove2O08848 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 AC174742.1-201ENSMUST00000218272 304 ntBASIC14.31□□□□□ -0.12
Trove2O08848 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Trove2O08848 P2rx3-203ENSMUST00000111616 1315 ntTSL 5 BASIC14.31□□□□□ -0.12
Trove2O08848 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.31□□□□□ -0.12
Trove2O08848 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.31□□□□□ -0.12
Trove2O08848 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC14.31□□□□□ -0.12
Trove2O08848 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trove2O08848 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trove2O08848 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trove2O08848 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trove2O08848 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Slpi-201ENSMUST00000109367 876 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.3□□□□□ -0.12
Trove2O08848 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC14.3□□□□□ -0.12
Trove2O08848 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Gm27301-201ENSMUST00000184012 127 ntBASIC14.3□□□□□ -0.12
Trove2O08848 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC14.3□□□□□ -0.12
Trove2O08848 AC154572.2-201ENSMUST00000225105 997 ntBASIC14.3□□□□□ -0.12
Trove2O08848 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trove2O08848 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Trove2O08848 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Mrpl3-201ENSMUST00000035177 3972 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trove2O08848 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.3□□□□□ -0.12
Trove2O08848 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms