Protein–RNA interactions for Protein: F8VPK8

Pcdh9, Protocadherin 9, mousemouse

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh9F8VPK8 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Pcdh9F8VPK8 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Gm3809-201ENSMUST00000180973 1006 ntBASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Mir6990-201ENSMUST00000183724 91 ntBASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Pcdh9F8VPK8 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Gm25287-201ENSMUST00000103846 110 ntBASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Gm22918-201ENSMUST00000103855 110 ntBASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Gm44335-201ENSMUST00000196879 141 ntBASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Gm44297-201ENSMUST00000198304 141 ntBASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Gm44346-201ENSMUST00000198851 141 ntBASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Gm18027-201ENSMUST00000218947 619 ntBASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Chchd1-203ENSMUST00000224633 557 ntBASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Top1mt-201ENSMUST00000000958 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Pcdh9F8VPK8 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Gm9824-201ENSMUST00000178707 561 ntBASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Gm29741-201ENSMUST00000192667 421 ntBASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Gm43125-201ENSMUST00000201724 730 ntBASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 AC139054.1-201ENSMUST00000226898 1598 ntBASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Pcdh9F8VPK8 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 28.8 ms