Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Auts2-212ENSMUST00000178555 309 ntBASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 AC154621.1-201ENSMUST00000226155 1119 ntBASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 AC154846.1-201ENSMUST00000226278 862 ntBASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cpsf4lE9Q2N0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Gm11557-201ENSMUST00000120200 1008 ntBASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Gm8927-201ENSMUST00000181978 981 ntBASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Aym1-201ENSMUST00000066573 528 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Gm3222-201ENSMUST00000071282 990 ntBASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Cpsf4lE9Q2N0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Clip2-201ENSMUST00000036999 4893 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Gm13385-201ENSMUST00000121089 220 ntBASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Gm27838-201ENSMUST00000184829 128 ntBASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Gm29667-201ENSMUST00000190817 490 ntBASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Gm4971-201ENSMUST00000205991 1108 ntBASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC11.78□□□□□ -0.52
Cpsf4lE9Q2N0 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms