Protein–RNA interactions for Protein: B9EKI3

Tmf1, TATA element modulatory factor, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmf1B9EKI3 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Tmf1B9EKI3 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tmf1B9EKI3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Tmf1B9EKI3 Gm37015-201ENSMUST00000192763 1521 ntBASIC18.84■□□□□ 0.61
Tmf1B9EKI3 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
Tmf1B9EKI3 AC154527.2-201ENSMUST00000225256 1466 ntBASIC18.84■□□□□ 0.61
Tmf1B9EKI3 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Kcna1-202ENSMUST00000203094 3150 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Tmf1B9EKI3 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Icam4-201ENSMUST00000001040 971 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tmf1B9EKI3 Nxpe3-201ENSMUST00000099705 6430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Gm8337-201ENSMUST00000187358 1938 ntBASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Gm15411-202ENSMUST00000201913 668 ntTSL 3 BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Phgr1-201ENSMUST00000061360 538 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tmf1B9EKI3 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 AC154687.2-201ENSMUST00000223853 640 ntBASIC18.81■□□□□ 0.6
Tmf1B9EKI3 AC125350.2-201ENSMUST00000224737 727 ntBASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.81■□□□□ 0.6
Tmf1B9EKI3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tmf1B9EKI3 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms