Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Ube2g1-201ENSMUST00000021148 3815 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Gm9347-201ENSMUST00000211473 1607 ntBASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Syt1-202ENSMUST00000105276 4820 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Plekhg2-203ENSMUST00000121085 4649 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Gm10275-202ENSMUST00000168697 495 ntBASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Gm10275-201ENSMUST00000092620 635 ntBASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Rnf152-202ENSMUST00000172299 8406 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Gm12887B1AVM1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm12887B1AVM1 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm12887B1AVM1 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm12887B1AVM1 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.27□□□□□ -0.6
Gm12887B1AVM1 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Gm15173-201ENSMUST00000122049 433 ntBASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Gm16026-204ENSMUST00000162652 683 ntBASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Gm45638-201ENSMUST00000211507 2878 ntBASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Ggnbp1-203ENSMUST00000133257 5012 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
Gm12887B1AVM1 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Gm28386-201ENSMUST00000189147 1849 ntBASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.26□□□□□ -0.61
Gm12887B1AVM1 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms