Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Krt28A6BLY7 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Krt28A6BLY7 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Krt28A6BLY7 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Krt28A6BLY7 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Gm9347-201ENSMUST00000211473 1607 ntBASIC15.37■□□□□ 0.05
Krt28A6BLY7 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Gm14381-201ENSMUST00000122105 414 ntBASIC15.37■□□□□ 0.05
Krt28A6BLY7 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC15.37■□□□□ 0.05
Krt28A6BLY7 2010001A14Rik-203ENSMUST00000152790 714 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 2310057J18Rik-201ENSMUST00000015663 1238 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 AC154462.2-201ENSMUST00000227519 370 ntBASIC15.37■□□□□ 0.05
Krt28A6BLY7 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC15.37■□□□□ 0.05
Krt28A6BLY7 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC15.36■□□□□ 0.05
Krt28A6BLY7 Gm12749-201ENSMUST00000122138 1159 ntBASIC15.36■□□□□ 0.05
Krt28A6BLY7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Gm7895-201ENSMUST00000187459 1173 ntBASIC15.36■□□□□ 0.05
Krt28A6BLY7 Gm29741-201ENSMUST00000192667 421 ntBASIC15.36■□□□□ 0.05
Krt28A6BLY7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Gm37497-201ENSMUST00000195830 798 ntBASIC15.36■□□□□ 0.05
Krt28A6BLY7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.36■□□□□ 0.05
Krt28A6BLY7 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Krt28A6BLY7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Gm22323-201ENSMUST00000103832 109 ntBASIC15.35■□□□□ 0.05
Krt28A6BLY7 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.35■□□□□ 0.05
Krt28A6BLY7 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Gm25261-201ENSMUST00000157416 134 ntBASIC15.35■□□□□ 0.05
Krt28A6BLY7 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.35■□□□□ 0.05
Krt28A6BLY7 AC073947.2-201ENSMUST00000215888 1130 ntBASIC15.35■□□□□ 0.05
Krt28A6BLY7 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Krt28A6BLY7 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Krt28A6BLY7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms