Protein–RNA interactions for Protein: A0A0G2JFS9

Atg4a-ps, Cysteine protease, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4a-psA0A0G2JFS9 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Atg4a-psA0A0G2JFS9 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.93■□□□□ 0.3
Atg4a-psA0A0G2JFS9 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC16.93■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gm21854-201ENSMUST00000179901 471 ntBASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Mir8102-201ENSMUST00000184148 139 ntBASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gm14452-201ENSMUST00000118680 1632 ntBASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC16.92■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gm15321-201ENSMUST00000121290 288 ntBASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Auts2-212ENSMUST00000178555 309 ntBASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gm27838-201ENSMUST00000184829 128 ntBASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Atg4a-psA0A0G2JFS9 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atg4a-psA0A0G2JFS9 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.89■□□□□ 0.29
Atg4a-psA0A0G2JFS9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Atg4a-psA0A0G2JFS9 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Atg4a-psA0A0G2JFS9 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Atg4a-psA0A0G2JFS9 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms