Protein–RNA interactions for Protein: Q9Z0D9

Cx3cr1, CX3C chemokine receptor 1, mousemouse

Predictions only

Length 354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cr1Q9Z0D9 Thap2-203ENSMUST00000218989 527 ntBASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Gstm7-201ENSMUST00000004137 1377 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Mir7036b-201ENSMUST00000184791 63 ntBASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Cx3cr1Q9Z0D9 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Nphp4-201ENSMUST00000056567 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Tbr1-201ENSMUST00000048934 3977 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm13597-201ENSMUST00000121239 375 ntBASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Ank2-226ENSMUST00000189368 339 ntBASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Acsl6-210ENSMUST00000108905 5807 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC11.81□□□□□ -0.52
Cx3cr1Q9Z0D9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Col14a1-203ENSMUST00000110221 5679 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Zscan29-205ENSMUST00000163766 3611 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Cx3cr1Q9Z0D9 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 53.9 ms