Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3aQ9JKX8 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Upk3aQ9JKX8 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.43□□□□□ -0.26
Upk3aQ9JKX8 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Upk3aQ9JKX8 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Brpf1-209ENSMUST00000204198 4307 ntTSL 5 BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Upk3aQ9JKX8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Gm18905-201ENSMUST00000205454 928 ntBASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 AC165157.4-201ENSMUST00000220587 139 ntBASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Upk3aQ9JKX8 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Gm22189-201ENSMUST00000103822 86 ntBASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Gm44719-201ENSMUST00000206404 149 ntBASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Gm17795-201ENSMUST00000214505 757 ntBASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Gm9797-201ENSMUST00000052902 613 ntBASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Upk3aQ9JKX8 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.27
Upk3aQ9JKX8 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Upk3aQ9JKX8 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.4□□□□□ -0.27
Upk3aQ9JKX8 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.39□□□□□ -0.27
Upk3aQ9JKX8 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms