Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Gm14752-201ENSMUST00000120719 2075 ntBASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Lima1Q9ERG0 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Mrps30-201ENSMUST00000022245 3319 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Map6-205ENSMUST00000207883 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Lima1Q9ERG0 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Gm6226-201ENSMUST00000117765 1146 ntBASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Gm5264-201ENSMUST00000190584 848 ntBASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Gm20553-201ENSMUST00000204205 844 ntBASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Gm12020-201ENSMUST00000119030 2042 ntBASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Lima1Q9ERG0 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Gm17271-201ENSMUST00000165535 355 ntBASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Gm37230-201ENSMUST00000194491 818 ntBASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Gm43514-201ENSMUST00000198852 424 ntBASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Lima1Q9ERG0 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.78□□□□□ -0.2
Lima1Q9ERG0 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms