Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
U2af1Q9D883 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC18.35■□□□□ 0.53
U2af1Q9D883 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
U2af1Q9D883 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC18.35■□□□□ 0.53
U2af1Q9D883 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
U2af1Q9D883 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
U2af1Q9D883 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Trav3d-3-201ENSMUST00000103599 276 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Trav3n-3-201ENSMUST00000103625 276 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Gm3809-201ENSMUST00000180973 1006 ntBASIC18.34■□□□□ 0.53
U2af1Q9D883 Trav3-3-202ENSMUST00000183835 276 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
U2af1Q9D883 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Gm5279-201ENSMUST00000199575 745 ntBASIC18.34■□□□□ 0.53
U2af1Q9D883 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Gm18905-201ENSMUST00000205454 928 ntBASIC18.34■□□□□ 0.53
U2af1Q9D883 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
U2af1Q9D883 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
U2af1Q9D883 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
U2af1Q9D883 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC18.33■□□□□ 0.52
U2af1Q9D883 Gm14928-201ENSMUST00000120198 477 ntBASIC18.33■□□□□ 0.52
U2af1Q9D883 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC18.33■□□□□ 0.52
U2af1Q9D883 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
U2af1Q9D883 Gm37917-201ENSMUST00000194711 392 ntBASIC18.33■□□□□ 0.52
U2af1Q9D883 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC18.33■□□□□ 0.52
U2af1Q9D883 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
U2af1Q9D883 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC18.32■□□□□ 0.52
U2af1Q9D883 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
U2af1Q9D883 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Tmem128-202ENSMUST00000119047 726 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Ldha-ps-201ENSMUST00000119390 995 ntBASIC18.32■□□□□ 0.52
U2af1Q9D883 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC18.32■□□□□ 0.52
U2af1Q9D883 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
U2af1Q9D883 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Arhgef33-209ENSMUST00000225223 714 ntBASIC18.32■□□□□ 0.52
U2af1Q9D883 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC18.32■□□□□ 0.52
U2af1Q9D883 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
U2af1Q9D883 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
U2af1Q9D883 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms