Protein–RNA interactions for Protein: Q9CWM2

Cdca4, Cell division cycle-associated protein 4, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdca4Q9CWM2 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdca4Q9CWM2 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Cdca4Q9CWM2 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Cdca4Q9CWM2 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Cdca4Q9CWM2 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdca4Q9CWM2 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdca4Q9CWM2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdca4Q9CWM2 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdca4Q9CWM2 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.77□□□□□ -0.36
Cdca4Q9CWM2 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.77□□□□□ -0.36
Cdca4Q9CWM2 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdca4Q9CWM2 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Cdca4Q9CWM2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Gm12428-201ENSMUST00000119844 727 ntBASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Gm38294-201ENSMUST00000192831 381 ntBASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 AC139382.1-201ENSMUST00000221402 498 ntBASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Fam71a-201ENSMUST00000171798 2234 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Cdca4Q9CWM2 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Rap2b-201ENSMUST00000049064 6793 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Gm13616-201ENSMUST00000120600 222 ntBASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Gm27618-201ENSMUST00000183671 60 ntBASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Gm27533-201ENSMUST00000183800 152 ntBASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Cdca4Q9CWM2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Taf3-202ENSMUST00000114906 583 ntTSL 2 BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Cdca4Q9CWM2 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms