Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm17837-201ENSMUST00000186435 985 ntBASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm44608-201ENSMUST00000206827 855 ntBASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 mt-Nd3-201ENSMUST00000082411 348 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm10710-201ENSMUST00000047876 3971 ntBASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Rnf11-201ENSMUST00000030284 4061 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.18□□□□□ -0.14
Retreg3Q9CQV4 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Gm26474-201ENSMUST00000116762 122 ntBASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Pou2f3-rs1-201ENSMUST00000120271 1046 ntBASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 1700065O20Rik-201ENSMUST00000186872 710 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 AC173345.3-201ENSMUST00000221245 1093 ntBASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Cldn13-201ENSMUST00000008987 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Retreg3Q9CQV4 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.16□□□□□ -0.14
Retreg3Q9CQV4 Gm43438-201ENSMUST00000198133 379 ntBASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 66.2 ms