Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Gm44945-201ENSMUST00000206764 1187 ntBASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Gm45747-201ENSMUST00000212203 999 ntBASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 AC133598.3-202ENSMUST00000224219 531 ntBASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Irak2-202ENSMUST00000089022 2974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Ska1Q9CPV1 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Gm17271-201ENSMUST00000165535 355 ntBASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Ska1Q9CPV1 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Gm10728-201ENSMUST00000194292 1829 ntBASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Gm12260-201ENSMUST00000122447 411 ntBASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Mir3113-201ENSMUST00000175478 76 ntBASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Gm18206-201ENSMUST00000207027 926 ntBASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Ska1Q9CPV1 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Ska1Q9CPV1 AC154262.2-201ENSMUST00000224310 2293 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms