Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Gm10782-202ENSMUST00000223775 1480 ntBASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Pcdh15Q99PJ1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Sra1-205ENSMUST00000173875 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Gm11331-201ENSMUST00000119764 288 ntBASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Odf4-202ENSMUST00000125134 646 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Gm454-201ENSMUST00000160126 751 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Gm22121-201ENSMUST00000175148 54 ntBASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Tmem14a-202ENSMUST00000027065 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Pcdh15Q99PJ1 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Gm27023-201ENSMUST00000182372 285 ntBASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Gstp-ps-201ENSMUST00000195526 631 ntBASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.42■□□□□ 0.06
Pcdh15Q99PJ1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Fgfr1op2-204ENSMUST00000111663 2880 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gm44981-201ENSMUST00000205549 1943 ntBASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Cyb5d1-202ENSMUST00000108660 1034 ntTSL 5 BASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gm11531-201ENSMUST00000117614 555 ntBASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Gm14109-201ENSMUST00000118814 309 ntBASIC15.41■□□□□ 0.06
Pcdh15Q99PJ1 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms