Protein–RNA interactions for Protein: Q99P72

Rtn4, Reticulon-4, mousemouse

Known RBP Predictions only

Length 1,162 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4Q99P72 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Gm14152-201ENSMUST00000127020 1073 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Gm27437-201ENSMUST00000183429 107 ntBASIC18.08■□□□□ 0.48
Rtn4Q99P72 Gm38384-201ENSMUST00000195413 1122 ntBASIC18.08■□□□□ 0.48
Rtn4Q99P72 Gm43906-201ENSMUST00000203194 906 ntBASIC18.08■□□□□ 0.48
Rtn4Q99P72 Gm44760-201ENSMUST00000206375 1173 ntBASIC18.08■□□□□ 0.48
Rtn4Q99P72 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Olfr1275-201ENSMUST00000099620 1020 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Gm11839-201ENSMUST00000120647 1953 ntBASIC18.08■□□□□ 0.48
Rtn4Q99P72 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Ebag9-202ENSMUST00000226165 1931 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
Rtn4Q99P72 Cd3e-201ENSMUST00000102832 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 AC148324.1-201ENSMUST00000219034 4240 ntBASIC18.07■□□□□ 0.48
Rtn4Q99P72 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Gm18352-201ENSMUST00000189113 902 ntBASIC18.07■□□□□ 0.48
Rtn4Q99P72 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Gm45098-201ENSMUST00000207179 657 ntBASIC18.07■□□□□ 0.48
Rtn4Q99P72 AC131743.3-201ENSMUST00000222099 662 ntBASIC18.07■□□□□ 0.48
Rtn4Q99P72 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Satb2-201ENSMUST00000042857 6277 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Rtn4Q99P72 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm11672-201ENSMUST00000140380 645 ntTSL 5 BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm27306-201ENSMUST00000183970 107 ntBASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm37215-201ENSMUST00000194927 1259 ntBASIC18.06■□□□□ 0.48
Rtn4Q99P72 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm20177-201ENSMUST00000203705 334 ntBASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm18944-201ENSMUST00000207672 643 ntBASIC18.06■□□□□ 0.48
Rtn4Q99P72 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm45579-201ENSMUST00000209367 887 ntTSL 5 BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm10313-201ENSMUST00000095320 1002 ntBASIC18.06■□□□□ 0.48
Rtn4Q99P72 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm5860-202ENSMUST00000151038 1711 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 AC124751.1-201ENSMUST00000222716 1408 ntBASIC18.06■□□□□ 0.48
Rtn4Q99P72 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Rtn4Q99P72 Oas1a-201ENSMUST00000080322 1885 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Sox5os1-201ENSMUST00000156994 1585 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Gm6539-201ENSMUST00000119157 1064 ntBASIC18.05■□□□□ 0.48
Rtn4Q99P72 Gm5277-201ENSMUST00000164923 556 ntBASIC18.05■□□□□ 0.48
Rtn4Q99P72 Gm6098-201ENSMUST00000180234 330 ntBASIC18.05■□□□□ 0.48
Rtn4Q99P72 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Gm44344-201ENSMUST00000200287 129 ntBASIC18.05■□□□□ 0.48
Rtn4Q99P72 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 AC152169.2-201ENSMUST00000224558 613 ntBASIC18.05■□□□□ 0.48
Rtn4Q99P72 AC090659.2-201ENSMUST00000225378 1186 ntBASIC18.05■□□□□ 0.48
Rtn4Q99P72 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Rtn4Q99P72 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms