Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Txn2-201ENSMUST00000005487 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Tmed8-201ENSMUST00000037418 7409 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Nkx6-1Q99MA9 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Gm44397-201ENSMUST00000195950 113 ntBASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Gm19184-201ENSMUST00000196798 928 ntBASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 AC159747.1-201ENSMUST00000219903 265 ntBASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Gm37015-201ENSMUST00000192763 1521 ntBASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Cep170b-203ENSMUST00000179041 6565 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Nkx6-1Q99MA9 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Rnf14-203ENSMUST00000171461 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Epb41l1-202ENSMUST00000103135 6177 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Gm11803-201ENSMUST00000119966 444 ntBASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Gm13350-201ENSMUST00000120519 479 ntBASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Gm27516-201ENSMUST00000184237 98 ntBASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Gm38266-201ENSMUST00000194931 421 ntBASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Gm3961-201ENSMUST00000204425 994 ntBASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Gm44608-201ENSMUST00000206827 855 ntBASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Gm24526-201ENSMUST00000082921 158 ntBASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Nkx6-1Q99MA9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nkx6-1Q99MA9 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 34.9 ms