Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Gm15590-201ENSMUST00000078419 552 ntBASIC14.09□□□□□ -0.15
Cdk9Q99J95 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 P4ha1-202ENSMUST00000092512 2387 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Cdk9Q99J95 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdk9Q99J95 Ssr1-203ENSMUST00000225246 1825 ntBASIC14.08□□□□□ -0.15
Cdk9Q99J95 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.08□□□□□ -0.15
Cdk9Q99J95 Xndc1-201ENSMUST00000094130 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Cdk9Q99J95 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Cdk9Q99J95 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.08□□□□□ -0.15
Cdk9Q99J95 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC14.08□□□□□ -0.15
Cdk9Q99J95 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Gm8584-201ENSMUST00000171982 758 ntBASIC14.08□□□□□ -0.16
Cdk9Q99J95 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Cdk9Q99J95 Alg2-201ENSMUST00000044148 3021 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Gm13036-201ENSMUST00000117799 748 ntBASIC14.07□□□□□ -0.16
Cdk9Q99J95 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Fam53b-201ENSMUST00000065371 5052 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Cdk9Q99J95 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.06□□□□□ -0.16
Cdk9Q99J95 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Ciz1-202ENSMUST00000113331 2604 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.06□□□□□ -0.16
Cdk9Q99J95 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.06□□□□□ -0.16
Cdk9Q99J95 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Cdk9Q99J95 Gm26867-201ENSMUST00000180963 3615 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms