Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col20a1Q923P0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col20a1Q923P0 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col20a1Q923P0 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC16.44■□□□□ 0.22
Col20a1Q923P0 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Gm27892-201ENSMUST00000185017 106 ntBASIC16.44■□□□□ 0.22
Col20a1Q923P0 Gm5069-202ENSMUST00000192714 1011 ntBASIC16.44■□□□□ 0.22
Col20a1Q923P0 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col20a1Q923P0 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Pcdha5-201ENSMUST00000192168 5206 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Mir1894-201ENSMUST00000122802 81 ntBASIC16.43■□□□□ 0.22
Col20a1Q923P0 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Gm8463-201ENSMUST00000208573 613 ntBASIC16.43■□□□□ 0.22
Col20a1Q923P0 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Cdk7-205ENSMUST00000225990 1159 ntBASIC16.43■□□□□ 0.22
Col20a1Q923P0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Ifi27-202ENSMUST00000076702 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Col20a1Q923P0 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.42■□□□□ 0.22
Col20a1Q923P0 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Ptgr2-205ENSMUST00000135001 1286 ntTSL 5 BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Gm17150-201ENSMUST00000165577 381 ntBASIC16.42■□□□□ 0.22
Col20a1Q923P0 Gm17794-201ENSMUST00000220252 955 ntBASIC16.42■□□□□ 0.22
Col20a1Q923P0 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Col20a1Q923P0 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC16.41■□□□□ 0.22
Col20a1Q923P0 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Col20a1Q923P0 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms