Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Gm27300-201ENSMUST00000184085 97 ntBASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Gm27335-201ENSMUST00000184758 97 ntBASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Ucn-202ENSMUST00000201184 499 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 E330011O21Rik-205ENSMUST00000211317 1062 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Lrrc7-205ENSMUST00000200137 7321 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Ddx39-202ENSMUST00000109810 1794 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Mbnl2-204ENSMUST00000227012 2390 ntBASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Pcdhb3Q91XZ7 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb3Q91XZ7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb3Q91XZ7 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb3Q91XZ7 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
Pcdhb3Q91XZ7 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb3Q91XZ7 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Pcdhb3Q91XZ7 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Best4-ps-201ENSMUST00000129783 1380 ntBASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 1700108N11Rik-201ENSMUST00000153051 917 ntTSL 2 BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Gm16107-201ENSMUST00000162523 862 ntBASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Gm22119-201ENSMUST00000175594 99 ntBASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Gm43575-201ENSMUST00000196420 516 ntBASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Gm43767-201ENSMUST00000198933 381 ntBASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 AC147366.1-201ENSMUST00000227671 852 ntBASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Pcdhb3Q91XZ7 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Col5a1-201ENSMUST00000028280 8406 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Hhipl2-202ENSMUST00000192527 2310 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 2810454H06Rik-201ENSMUST00000189942 3148 ntBASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 D230022J07Rik-201ENSMUST00000144735 1062 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Gm25911-201ENSMUST00000157621 56 ntBASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 9530097N15Rik-201ENSMUST00000197819 1068 ntBASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Gm44945-201ENSMUST00000206764 1187 ntBASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Gm10046-201ENSMUST00000208208 632 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Gm7899-201ENSMUST00000192935 1897 ntBASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Pik3r1-201ENSMUST00000035532 2923 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
Pcdhb3Q91XZ7 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Pcdhb3Q91XZ7 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 47.2 ms