Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Gm27494-201ENSMUST00000184735 189 ntBASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Gm5712-201ENSMUST00000199748 1043 ntBASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Gm13332-201ENSMUST00000120451 1398 ntBASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Olfr667-202ENSMUST00000217177 2695 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Gm43061-201ENSMUST00000198850 2241 ntBASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Pcdhb4Q91XZ6 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.19
Pcdhb4Q91XZ6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.19
Pcdhb4Q91XZ6 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Gm13365-201ENSMUST00000121188 973 ntBASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Gm12882-201ENSMUST00000121696 517 ntBASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Pcdhb4Q91XZ6 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Mir1895-201ENSMUST00000122615 79 ntBASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC13.88□□□□□ -0.19
Pcdhb4Q91XZ6 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pcdhb4Q91XZ6 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb4Q91XZ6 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb4Q91XZ6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb4Q91XZ6 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb4Q91XZ6 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pcdhb4Q91XZ6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 41.1 ms