Protein–RNA interactions for Protein: Q91W36

Usp3, Ubiquitin carboxyl-terminal hydrolase 3, mousemouse

Known RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp3Q91W36 Odf3l2-201ENSMUST00000095464 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC14.37□□□□□ -0.11
Usp3Q91W36 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Usp3Q91W36 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp3Q91W36 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.36□□□□□ -0.11
Usp3Q91W36 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Gm4593-201ENSMUST00000205334 1555 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.36□□□□□ -0.11
Usp3Q91W36 Gm13385-201ENSMUST00000121089 220 ntBASIC14.36□□□□□ -0.11
Usp3Q91W36 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Gm8927-201ENSMUST00000181978 981 ntBASIC14.36□□□□□ -0.11
Usp3Q91W36 Gm2445-201ENSMUST00000182798 989 ntBASIC14.36□□□□□ -0.11
Usp3Q91W36 AL593843.1-201ENSMUST00000195891 145 ntBASIC14.36□□□□□ -0.11
Usp3Q91W36 Gm15396-201ENSMUST00000209101 1089 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC14.36□□□□□ -0.11
Usp3Q91W36 AC139580.1-202ENSMUST00000223574 928 ntBASIC14.36□□□□□ -0.11
Usp3Q91W36 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Gm3222-201ENSMUST00000071282 990 ntBASIC14.36□□□□□ -0.11
Usp3Q91W36 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Usp3Q91W36 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.36□□□□□ -0.11
Usp3Q91W36 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp3Q91W36 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp3Q91W36 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp3Q91W36 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Pxylp1-204ENSMUST00000120101 3189 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp3Q91W36 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Usp3Q91W36 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Usp3Q91W36 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Gm16140-201ENSMUST00000117191 1060 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.35□□□□□ -0.11
Usp3Q91W36 Gm29741-201ENSMUST00000192667 421 ntBASIC14.35□□□□□ -0.11
Usp3Q91W36 Gm17795-201ENSMUST00000214505 757 ntBASIC14.35□□□□□ -0.11
Usp3Q91W36 CT010431.1-201ENSMUST00000221249 1080 ntBASIC14.35□□□□□ -0.11
Usp3Q91W36 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Usp3Q91W36 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
Usp3Q91W36 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp3Q91W36 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Usp3Q91W36 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp3Q91W36 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC14.34□□□□□ -0.11
Usp3Q91W36 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Usp3Q91W36 Gm28631-201ENSMUST00000190740 334 ntBASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms