Protein–RNA interactions for Protein: Q8R326

Pspc1, Paraspeckle component 1, mousemouse

Known RBP Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pspc1Q8R326 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Gm45711-202ENSMUST00000164175 979 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC16.03■□□□□ 0.16
Pspc1Q8R326 AC155252.1-201ENSMUST00000226462 1208 ntBASIC16.03■□□□□ 0.16
Pspc1Q8R326 AC149294.4-201ENSMUST00000227870 882 ntBASIC16.03■□□□□ 0.16
Pspc1Q8R326 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Pspc1Q8R326 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Pspc1Q8R326 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.02■□□□□ 0.16
Pspc1Q8R326 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.02■□□□□ 0.16
Pspc1Q8R326 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Gm13385-201ENSMUST00000121089 220 ntBASIC16.02■□□□□ 0.16
Pspc1Q8R326 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.02■□□□□ 0.16
Pspc1Q8R326 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pspc1Q8R326 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.02■□□□□ 0.16
Pspc1Q8R326 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Pspc1Q8R326 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Pspc1Q8R326 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pspc1Q8R326 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pspc1Q8R326 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pspc1Q8R326 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Pspc1Q8R326 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pspc1Q8R326 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pspc1Q8R326 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pspc1Q8R326 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Pspc1Q8R326 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC16.01■□□□□ 0.15
Pspc1Q8R326 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.01■□□□□ 0.15
Pspc1Q8R326 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Gm8927-201ENSMUST00000181978 981 ntBASIC16.01■□□□□ 0.15
Pspc1Q8R326 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.01■□□□□ 0.15
Pspc1Q8R326 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Gm7446-201ENSMUST00000221035 1240 ntBASIC16.01■□□□□ 0.15
Pspc1Q8R326 Gm3222-201ENSMUST00000071282 990 ntBASIC16.01■□□□□ 0.15
Pspc1Q8R326 Gm25857-201ENSMUST00000082788 129 ntBASIC16.01■□□□□ 0.15
Pspc1Q8R326 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Pspc1Q8R326 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms