Protein–RNA interactions for Protein: Q8C3B8

Rft1, Protein RFT1 homolog, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rft1Q8C3B8 Gm45612-201ENSMUST00000211320 160 ntBASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Rft1Q8C3B8 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Apc2-201ENSMUST00000020349 9074 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Slc39a2-201ENSMUST00000047726 2334 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Gm26308-201ENSMUST00000157768 69 ntBASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 AC155252.2-201ENSMUST00000226946 680 ntBASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Gpr146-202ENSMUST00000053120 1040 ntBASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Rft1Q8C3B8 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Gm16026-204ENSMUST00000162652 683 ntBASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Gm20553-201ENSMUST00000204205 844 ntBASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Tspan32-211ENSMUST00000207211 1220 ntTSL 5 BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Chchd1-203ENSMUST00000224633 557 ntBASIC12.47□□□□□ -0.41
Rft1Q8C3B8 CT025555.1-201ENSMUST00000225901 1217 ntBASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Hist2h3b-201ENSMUST00000098843 488 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 AC131743.5-201ENSMUST00000220775 1618 ntBASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Rft1Q8C3B8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms