Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Prkcb-202ENSMUST00000064989 2911 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trub1Q8C0D0 Pja1-203ENSMUST00000113792 3038 ntAPPRIS P4 TSL 5 BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 AC153872.1-201ENSMUST00000199539 128 ntBASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Gm42872-201ENSMUST00000200026 1967 ntBASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trub1Q8C0D0 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Gm27680-201ENSMUST00000184192 160 ntBASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Gm21470-201ENSMUST00000187680 696 ntBASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Gm44344-201ENSMUST00000200287 129 ntBASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Mir497b-201ENSMUST00000093601 125 ntBASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trub1Q8C0D0 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Trub1Q8C0D0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms