Protein–RNA interactions for Protein: Q80TP3

Ubr5, E3 ubiquitin-protein ligase UBR5, mousemouse

Predictions only

Length 2,792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr5Q80TP3 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Ubr5Q80TP3 Skap1-202ENSMUST00000100519 1100 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Prox1os-201ENSMUST00000110279 828 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Snhg8-201ENSMUST00000196466 448 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Nmbr-201ENSMUST00000020015 1599 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm6335-201ENSMUST00000118081 1194 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm7816-201ENSMUST00000119884 1194 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm15542-201ENSMUST00000121585 1194 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm42838-201ENSMUST00000196503 439 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm45118-201ENSMUST00000208928 825 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm39185-201ENSMUST00000212941 540 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm38139-201ENSMUST00000195806 704 ntTSL 2 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm43058-201ENSMUST00000197645 625 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm9678-201ENSMUST00000198979 1149 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gm32025-201ENSMUST00000217960 307 ntBASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Itln1-201ENSMUST00000043094 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Ubr5Q80TP3 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Gm12500-202ENSMUST00000186471 2428 ntBASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 9030407P20Rik-201ENSMUST00000180933 2310 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Rtbdn-203ENSMUST00000121880 1223 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Gm37042-201ENSMUST00000193816 581 ntBASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Rpl18-201ENSMUST00000072503 679 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 1700110I01Rik-201ENSMUST00000112775 1671 ntTSL 5 BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Pitpnb-201ENSMUST00000086635 2761 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Ubr5Q80TP3 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr5Q80TP3 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr5Q80TP3 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr5Q80TP3 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC11.77□□□□□ -0.52
Ubr5Q80TP3 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr5Q80TP3 Exosc2-201ENSMUST00000038474 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr5Q80TP3 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr5Q80TP3 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr5Q80TP3 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Ubr5Q80TP3 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Ubr5Q80TP3 Sgsm1-203ENSMUST00000112324 1102 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Ubr5Q80TP3 Gm3096-201ENSMUST00000185770 364 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 44 ms