Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Chmp4c-201ENSMUST00000029049 6188 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Ddx55Q6ZPL9 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Ripk1-201ENSMUST00000021844 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Zdhhc8-201ENSMUST00000076957 4867 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Gm9755-201ENSMUST00000032981 1356 ntBASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Gm11400-201ENSMUST00000120853 1214 ntBASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 1110006O24Rik-201ENSMUST00000201728 768 ntBASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Ddx55Q6ZPL9 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Gm15236-201ENSMUST00000117309 379 ntBASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Mir3102-201ENSMUST00000175555 104 ntBASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Gm26927-201ENSMUST00000182385 965 ntBASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Gm4857-201ENSMUST00000192718 785 ntBASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Ormdl2-204ENSMUST00000219524 724 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Gm17330-201ENSMUST00000221047 165 ntBASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 CT485787.1-201ENSMUST00000225617 968 ntBASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 AC140406.1-201ENSMUST00000226481 465 ntBASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Ddx55Q6ZPL9 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Rhog-202ENSMUST00000106923 1321 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Gm5620-201ENSMUST00000077991 1348 ntBASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Gm43133-201ENSMUST00000197472 463 ntBASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Gm18934-201ENSMUST00000216671 1044 ntBASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Tmem40-201ENSMUST00000072933 1272 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Rn7sk-201ENSMUST00000083103 331 ntBASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Gm26315-201ENSMUST00000083890 321 ntBASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Gm10268-201ENSMUST00000085340 555 ntBASIC15.77■□□□□ 0.12
Ddx55Q6ZPL9 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 Unc5d-202ENSMUST00000209401 3081 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.77■□□□□ 0.11
Ddx55Q6ZPL9 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.77■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms