Protein–RNA interactions for Protein: Q6PFE3

Rad54b, DNA repair and recombination protein RAD54B, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rad54bQ6PFE3 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Rad54bQ6PFE3 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Gm15467-201ENSMUST00000120582 445 ntBASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Gm37714-201ENSMUST00000194742 342 ntBASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Dnaaf1-201ENSMUST00000093100 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Rad54bQ6PFE3 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Zfp354c-201ENSMUST00000000632 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Gm18889-201ENSMUST00000174284 929 ntBASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Gm27494-201ENSMUST00000184735 189 ntBASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Gm6443-201ENSMUST00000203599 874 ntBASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Rad54bQ6PFE3 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 H2af-ps-201ENSMUST00000119066 295 ntBASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Gm13332-201ENSMUST00000120451 1398 ntBASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Rad54bQ6PFE3 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms