Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm20445-201ENSMUST00000061905 565 ntBASIC14.08□□□□□ -0.16
Six4Q61321 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Six4Q61321 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Six4Q61321 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Six4Q61321 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Six4Q61321 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six4Q61321 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC14.08□□□□□ -0.16
Six4Q61321 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six4Q61321 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six4Q61321 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six4Q61321 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six4Q61321 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Six4Q61321 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Six4Q61321 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Actl7b-201ENSMUST00000095080 1439 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Six4Q61321 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Six4Q61321 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.07□□□□□ -0.16
Six4Q61321 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.07□□□□□ -0.16
Six4Q61321 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Gm42690-201ENSMUST00000197921 1836 ntBASIC14.07□□□□□ -0.16
Six4Q61321 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC14.07□□□□□ -0.16
Six4Q61321 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.07□□□□□ -0.16
Six4Q61321 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC14.07□□□□□ -0.16
Six4Q61321 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.07□□□□□ -0.16
Six4Q61321 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC14.07□□□□□ -0.16
Six4Q61321 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.07□□□□□ -0.16
Six4Q61321 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Six4Q61321 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Six4Q61321 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Six4Q61321 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Shpk-201ENSMUST00000006105 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Six4Q61321 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC14.06□□□□□ -0.16
Six4Q61321 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Gm15240-201ENSMUST00000118156 720 ntBASIC14.06□□□□□ -0.16
Six4Q61321 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.06□□□□□ -0.16
Six4Q61321 Gm16215-201ENSMUST00000161990 637 ntBASIC14.06□□□□□ -0.16
Six4Q61321 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Six4Q61321 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.06□□□□□ -0.16
Six4Q61321 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 AC125206.2-201ENSMUST00000217454 574 ntBASIC14.06□□□□□ -0.16
Six4Q61321 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.06□□□□□ -0.16
Six4Q61321 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Six4Q61321 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
Six4Q61321 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Six4Q61321 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Six4Q61321 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.05□□□□□ -0.16
Six4Q61321 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.05□□□□□ -0.16
Six4Q61321 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Six4Q61321 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Six4Q61321 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Six4Q61321 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 49.4 ms