Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim43aQ3TL54 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Troap-201ENSMUST00000039665 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 CT025555.1-201ENSMUST00000225901 1217 ntBASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trim43aQ3TL54 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim43aQ3TL54 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Gm37844-201ENSMUST00000192473 4097 ntBASIC14.8□□□□□ -0.04
Trim43aQ3TL54 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 4930470G03Rik-201ENSMUST00000122926 2447 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Hoxa7-202ENSMUST00000134367 807 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim43aQ3TL54 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms