Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Tmx3-201ENSMUST00000025515 4611 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Gm37133-201ENSMUST00000192705 1922 ntBASIC11.48□□□□□ -0.57
Trim63Q38HM4 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Dab2ip-201ENSMUST00000065001 6392 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Mgat1-203ENSMUST00000109194 2480 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Olfr1490-202ENSMUST00000213900 5165 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
Trim63Q38HM4 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Fam214b-203ENSMUST00000107957 3234 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Gm37411-201ENSMUST00000194180 2282 ntBASIC11.47□□□□□ -0.57
Trim63Q38HM4 AC116503.1-201ENSMUST00000215445 2192 ntBASIC11.47□□□□□ -0.57
Trim63Q38HM4 Pigc-201ENSMUST00000028021 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Gm14752-201ENSMUST00000120719 2075 ntBASIC11.47□□□□□ -0.57
Trim63Q38HM4 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Gm30648-202ENSMUST00000200648 1957 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Gm38102-201ENSMUST00000192791 1935 ntBASIC11.47□□□□□ -0.57
Trim63Q38HM4 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Pantr2-201ENSMUST00000180589 463 ntTSL 3 BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Chrna3-202ENSMUST00000214204 2414 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Slc26a2-202ENSMUST00000146409 7814 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Vezf1-201ENSMUST00000018521 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
Trim63Q38HM4 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Eps15l1-201ENSMUST00000163643 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Dnajc12-201ENSMUST00000043317 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Pogk-202ENSMUST00000128861 4848 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Dach2-201ENSMUST00000067219 2520 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Islr-201ENSMUST00000041477 2223 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Armcx2-203ENSMUST00000119010 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Pgap2-204ENSMUST00000120879 2141 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Gm10052-201ENSMUST00000168019 960 ntBASIC11.46□□□□□ -0.57
Trim63Q38HM4 Gm7286-201ENSMUST00000182691 1007 ntBASIC11.46□□□□□ -0.57
Trim63Q38HM4 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Gm7729-201ENSMUST00000050143 801 ntBASIC11.46□□□□□ -0.57
Trim63Q38HM4 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
Trim63Q38HM4 Enam-201ENSMUST00000031222 5483 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
Trim63Q38HM4 AC154404.1-201ENSMUST00000223601 2077 ntBASIC11.46□□□□□ -0.57
Trim63Q38HM4 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Terf2ip-201ENSMUST00000052138 3560 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Sv2a-201ENSMUST00000035371 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Myom3-201ENSMUST00000105854 5575 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC11.46□□□□□ -0.58
Trim63Q38HM4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
Trim63Q38HM4 Atp9a-204ENSMUST00000109177 3456 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC11.45□□□□□ -0.58
Trim63Q38HM4 Cpn2-201ENSMUST00000064856 4583 ntAPPRIS P1 TSL 1 (best) BASIC11.45□□□□□ -0.58
Retrieved 100 of 76,532 protein–RNA pairs in 45.4 ms