Protein–RNA interactions for Protein: Q2TV84

Trpm1, Transient receptor potential cation channel subfamily M member 1, mousemouse

Predictions only

Length 1,622 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trpm1Q2TV84 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Gm8862-201ENSMUST00000198379 1346 ntBASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Cox16-206ENSMUST00000168463 431 ntTSL 2 BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 AC154595.3-201ENSMUST00000224579 384 ntBASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Pga5-201ENSMUST00000025647 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Trpm1Q2TV84 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Gm15782-201ENSMUST00000121073 445 ntBASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Gm43509-201ENSMUST00000196551 2594 ntBASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Slc25a22-202ENSMUST00000106006 2277 ntTSL 5 BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 AC101945.2-201ENSMUST00000227886 1377 ntBASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Trpm1Q2TV84 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Ifna7-201ENSMUST00000105143 573 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Cep97-206ENSMUST00000122280 1057 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Pdlim2-204ENSMUST00000127836 920 ntTSL 5 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Gm24514-201ENSMUST00000174961 285 ntBASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 AC167669.2-201ENSMUST00000224417 1620 ntBASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Gm23200-201ENSMUST00000104379 132 ntBASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Gm15276-201ENSMUST00000145953 498 ntBASIC19.36■□□□□ 0.69
Trpm1Q2TV84 1700020N18Rik-201ENSMUST00000188956 547 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Tnni3-201ENSMUST00000098859 912 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Trpm1Q2TV84 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Gm9867-201ENSMUST00000192212 2647 ntBASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Gm13587-201ENSMUST00000152645 366 ntTSL 5 BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Gm14267-206ENSMUST00000226870 1209 ntBASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Trpm1Q2TV84 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm1Q2TV84 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Trpm1Q2TV84 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm1Q2TV84 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Trpm1Q2TV84 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms